Index of /compartMentModel_vignette

	Name	Last modified	Size	Description
	Parent Directory		-
	InternalControl_TRP1..>	2024-01-04 09:19	-
	InternalControl_TRP1..>	2024-01-04 18:31	-
	InternalControl_repr..>	2024-01-04 18:32	396K
	InternalControl_repr..>	2024-01-04 18:32	389K
	PRO_normalization	2024-11-29 12:41	4.2K
	PRO_normalization_si..>	2024-11-29 12:41	4.8K
	TRP125min_repressed_..>	2024-11-29 12:41	329K
	TRP125min_repressed_..>	2024-11-29 12:41	323K
	TRP_UpperLimitFile	2024-11-29 12:41	144
	TRP_limitfile_AllParams	2024-11-29 12:41	112
	biomed-central.csl	2024-11-29 12:41	5.8K
	compartmentModel_vig..>	2024-11-29 12:41	19K
	compartmentModel_vig..>	2024-11-29 12:41	2.4M
	createPrimaryTranscA..>	2024-11-29 12:41	15K
	customSummariseRateD..>	2024-11-29 12:41	19K
	density.TRP_12.5min_..>	2024-11-29 12:41	4.0M
	deseq2DataCreator_In..>	2024-11-29 12:41	1.7K
	figures/	2024-11-29 12:41	-
	generalPlotter.R	2024-11-29 12:41	84K
	normalization_factor.R	2024-11-29 12:41	2.2K
	paramFit_TRP_EntireR..>	2024-11-29 12:41	-
	paramFit_TRP_EntireR..>	2024-11-29 12:41	-
	parsePTACoordsToShor..>	2024-11-29 12:41	2.3K
	pause_workflow_funcs..>	2024-11-29 12:41	29K
	plotForConstrainedKp..>	2024-11-29 12:41	29K
	plotParamsFromRepeat..>	2024-11-29 12:41	678
	plotRateFuncs.R	2024-11-29 12:41	9.9K
	plotting_composites_..>	2024-11-29 12:41	16K
	processPRO_seqdata_p..>	2024-11-29 12:41	10K
	processingscripts/	2024-11-29 12:41	-
	references.bib	2024-11-29 12:41	3.3K
	render_html.R	2024-11-29 12:41	590
	residualAndFitPlotter.R	2024-11-29 12:41	22K
	runDeseq2_TRP_12min_..>	2024-11-29 12:41	8.0K
	run_pauseworkflow_In..>	2024-11-29 12:41	6.3K
	saveSizeFactorsAsTxt..>	2024-11-29 12:41	1.3K
	trackHubs.txt	2024-11-29 12:41	408
	transformRates.R	2024-11-29 12:41	1.5K